Product Details

SNP ID

rs11999177

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.9:111550075 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GTTGTTGTTTTTTGTGTTGTGTGTT[A/T]TTTGTTTTCGTTTTTGTTTTACTGT

Phenotype

MIM: 601274

Polymorphism

A/T, Transversion Substitution

Allele Nomenclature

Literature Links

PTGR1 PubMed Links

Additional Information

For this assay, SNP(s) [rs140245928] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PTGR1

Gene Name

prostaglandin reductase 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001146108.1	9585	Intron			NP_001139580.1
NM_001146109.1	9585	Intron			NP_001139581.1
NM_012212.3	9585	Intron			NP_036344.2
XM_011518394.2	9585	Intron			XP_011516696.1
XM_011518395.2	9585	Intron			XP_011516697.1
XM_017014485.1	9585	Intron			XP_016869974.1

Gene

ZNF483

Gene Name

zinc finger protein 483

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001007169.3	9585	Intron			NP_001007170.1
NM_133464.3	9585	Intron			NP_597721.2
XM_011518300.2	9585	UTR 3			XP_011516602.1
XM_017014337.1	9585	UTR 3			XP_016869826.1
XM_017014338.1	9585	UTR 3			XP_016869827.1
XM_017014339.1	9585	Intron			XP_016869828.1

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