Product Details

SNP ID

rs1574197

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.5:80654908 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

AGCGGCTGCAGCGGCCGCAGCGGCC[C/G]CAGCGCCCCCAGCGCCCCCAGCTCC

Phenotype

MIM: 126060 MIM: 600887

Polymorphism

C/G, Transversion Substitution

Allele Nomenclature

Literature Links

DHFR PubMed Links

Additional Information

For this assay, SNP(s) [rs2001675] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

DHFR

Gene Name

dihydrofolate reductase

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_000791.3	261	UTR 5			NP_000782.1
NM_001290354.1	261	UTR 5			NP_001277283.1
NM_001290357.1	261	UTR 5			NP_001277286.1

Gene

MSH3

Gene Name

mutS homolog 3

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_002439.4	261	Missense Mutation	CCA,GCA	P61A	NP_002430.3

Gene

MTRNR2L2

Gene Name

MT-RNR2-like 2

There are no transcripts associated with this gene.

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