Product Details

SNP ID

rs56142402

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.18:58671560 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CTTCCGCCCCTGCCTCCGCGGCTCG[A/G]AGGCGAGCGGAAGGTGCCCCGGGGC

Phenotype

MIM: 604860

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

LOC101927322 PubMed Links

Additional Information

For this assay, SNP(s) [rs373689542] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LOC101927322

Gene Name

uncharacterized LOC101927322

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001289967.1	314	Missense Mutation	TCC,TTC	S29F	NP_001276896.1

Gene

LOC102724745

Gene Name

uncharacterized LOC102724745

There are no transcripts associated with this gene.

Gene

MALT1

Gene Name

MALT1 paracaspase

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_006785.3	314	UTR 5			NP_006776.1
NM_173844.2	314	UTR 5			NP_776216.1
XM_011525794.1	314	UTR 5			XP_011524096.1

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