Product Details

SNP ID

rs12336125

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.9:111558566 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

CATCTTGTATCTTCCCTACCCCAGC[C/T]CCAGAACAAACCATTTCTGGTTCCT

Phenotype

MIM: 601274

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

PTGR1 PubMed Links

Additional Information

For this assay, SNP(s) [rs79824527] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PTGR1

Gene Name

prostaglandin reductase 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001146108.1		Intron			NP_001139580.1
NM_001146109.1		Intron			NP_001139581.1
NM_012212.3		Intron			NP_036344.2
XM_011518394.2		Intron			XP_011516696.1
XM_011518395.2		Intron			XP_011516697.1
XM_017014485.1		Intron			XP_016869974.1

Gene

ZNF483

Gene Name

zinc finger protein 483

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001007169.3		Intron			NP_001007170.1
NM_133464.3		Intron			NP_597721.2
XM_011518300.2		Intron			XP_011516602.1
XM_017014337.1		Intron			XP_016869826.1
XM_017014338.1		Intron			XP_016869827.1
XM_017014339.1		Intron			XP_016869828.1

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