Product Details

SNP ID

rs11802159

Assay Type

Functionally Tested

NCBI dbSNP Submissions

16

Location

Chr.1:183647957 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GTAGGTTGGGTTGGAGTTGTCCACT[C/T]GGCATTTGAAAAAACTGTCCAGGAA

Phenotype

MIM: 609908 MIM: 605667

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

APOBEC4 PubMed Links

Additional Information

For this assay, SNP(s) [rs10911391] are located under a probe and SNP(s) [rs1174658] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

APOBEC4

Gene Name

apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_203454.2	1097	Silent Mutation	CCA,CCG	P275P	NP_982279.1

Gene

RGL1

Gene Name

ral guanine nucleotide dissociation stimulator like 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001297669.1	1097	Intron			NP_001284598.1
NM_001297670.1	1097	Intron			NP_001284599.1
NM_001297671.1	1097	Intron			NP_001284600.1
NM_001297672.1	1097	Intron			NP_001284601.1
NM_015149.4	1097	Intron			NP_055964.3
XM_011509339.2	1097	Intron			XP_011507641.1
XM_011509341.1	1097	Intron			XP_011507643.1
XM_011509342.2	1097	Intron			XP_011507644.1
XM_017000756.1	1097	Intron			XP_016856245.1

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