Product Details

SNP ID

rs11773176

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.7:2564844 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TGCTGATCAAGTTTTTCTAACTCCT[C/T]GTTGATCTTCTGCCTCGCTCTCCTG

Phenotype

MIM: 614506

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

BRAT1 PubMed Links

Additional Information

For this assay, SNP(s) [rs116093568] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

BRAT1

Gene Name

BRCA1 associated ATM activator 1

There are no transcripts associated with this gene.

Gene

IQCE

Gene Name

IQ motif containing E

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001287499.1		Intron			NP_001274428.1
NM_001287500.1		Intron			NP_001274429.1
NM_001287501.1		Intron			NP_001274430.1
NM_001287502.1		Intron			NP_001274431.1
NM_152558.4		Intron			NP_689771.3
XM_006715676.2		Intron			XP_006715739.1
XM_011515242.1		Intron			XP_011513544.1
XM_011515243.1		Intron			XP_011513545.1
XM_011515244.2		Intron			XP_011513546.1
XM_017011902.1		Intron			XP_016867391.1
XM_017011903.1		Intron			XP_016867392.1

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