Product Details

SNP ID

rs12482797

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.21:45413172 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CATCCCCACCCTTAGGGCAGAGCCC[C/T]GTAGGAGGGACTGGTTTGCAACGTG

Phenotype

MIM: 120328

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

COL18A1 PubMed Links

Additional Information

For this assay, SNP(s) [rs76701795] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

COL18A1

Gene Name

collagen type XVIII alpha 1 chain

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_030582.3		Intron			NP_085059.2
NM_130444.2		Intron			NP_569711.2
NM_130445.3		Intron			NP_569712.2

Gene

COL18A1-AS1

Gene Name

COL18A1 antisense RNA 1

There are no transcripts associated with this gene.

Gene

COL18A1-AS2

Gene Name

COL18A1 antisense RNA 2

There are no transcripts associated with this gene.

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