Product Details

SNP ID

rs1324062

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.13:91404657 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

CACAAACAGCACAGCCCTTGATTAG[C/T]TGCATCAGGGCCACATATGGCTACT

Phenotype

MIM: 602446

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

GPC5 PubMed Links

Additional Information

For this assay, SNP(s) [rs77544227] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

GPC5

Gene Name

glypican 5

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_004466.5		Intron			NP_004457.1
XM_011521054.2		Intron			XP_011519356.1
XM_011521055.2		Intron			XP_011519357.1
XM_011521056.2		Intron			XP_011519358.1
XM_011521057.2		Intron			XP_011519359.1
XM_011521058.2		Intron			XP_011519360.1
XM_011521059.2		Intron			XP_011519361.1
XM_011521060.2		Intron			XP_011519362.1
XM_017020435.1		Intron			XP_016875924.1
XM_017020436.1		Intron			XP_016875925.1
XM_017020437.1		Intron			XP_016875926.1

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