Product Details

SNP ID

rs1322429

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.6:159727968 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GGCGGCCGGAGAGACCGGCCACTCA[C/G]GGAGGCCGGAGGATGCCCTCCCCGG

Phenotype

MIM: 147460 MIM: 605442

Polymorphism

C/G, Transversion Substitution

Allele Nomenclature

Literature Links

SOD2 PubMed Links

Additional Information

For this assay, SNP(s) [rs117593249] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

SOD2

Gene Name

superoxide dismutase 2, mitochondrial

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_000636.3		Intron			NP_000627.2
NM_001024465.2		Intron			NP_001019636.1
NM_001024466.2		Intron			NP_001019637.1
NM_001322814.1		Intron			NP_001309743.1
NM_001322815.1		Intron			NP_001309744.1
NM_001322816.1		Intron			NP_001309745.1
NM_001322817.1		Intron			NP_001309746.1
NM_001322819.1		Intron			NP_001309748.1
NM_001322820.1		Intron			NP_001309749.1

Gene

WTAP

Gene Name

Wilms tumor 1 associated protein

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001270531.1		Intron			NP_001257460.1
NM_001270532.1		Intron			NP_001257461.1
NM_001270533.1		Intron			NP_001257462.1
NM_004906.4		Intron			NP_004897.2
NM_152857.2		Intron			NP_690596.1
NM_152858.2		Intron			NP_690597.1
XM_017011514.1		Intron			XP_016867003.1
XM_017011515.1		Intron			XP_016867004.1
XM_017011516.1		Intron			XP_016867005.1

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