Product Details

SNP ID

rs7187575

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.16:28978780 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

CTGTACCCGTCCTTAGCTTCAGGTG[C/T]CTTTGGTAGACACATAAACTCCCAT

Phenotype

MIM: 602354 MIM: 612583

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

LAT PubMed Links

Additional Information

For this assay, SNP(s) [rs116364234] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LAT

Gene Name

linker for activation of T-cells

There are no transcripts associated with this gene.

Gene

SPNS1

Gene Name

sphingolipid transporter 1 (putative)

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001142448.1		Intron			NP_001135920.1
NM_001142449.1		Intron			NP_001135921.1
NM_001142450.1		Intron			NP_001135922.1
NM_001142451.1		Intron			NP_001135923.1
NM_032038.2		Intron			NP_114427.1
XM_006721096.3		Intron			XP_006721159.1
XM_017023757.1		Intron			XP_016879246.1
XM_017023758.1		Intron			XP_016879247.1
XM_017023759.1		Intron			XP_016879248.1

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