Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: Eip63E
Entrez Gene ID: 38433
Gene Name: Ecdysone-induced protein 63E
Gene Aliases: CG10579, Dmel\CG10579, Dmel_CG10579, EIP63E, L63, PFTAIRE, Pftaire, cdc2-63E
Chromosome Location: Chr.3L: 3515751 - 3610521 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID): FBgn0005640

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001043116.3	NP_001036581.1	8 - 9	2304	58
	NM_001043117.3	NP_001036582.1	9 - 10	1393	58
	NM_001043118.3	NP_001036583.1	10 - 11	1698	58
	NM_001043119.3	NP_001036584.1	11 - 12	1507	58
	NM_001043120.3	NP_001036585.1	10 - 11	1726	58
	NM_001043121.2	NP_001036586.1	8 - 9	1565	58
	NM_001169869.2	NP_001163340.1	9 - 10	2079	58
	NM_001202113.2	NP_001189042.1	9 - 10	1710	58
	NM_001274444.1	NP_001261373.1	9 - 10	2343	58
	NM_079180.4	NP_523904.1	9 - 10	2343	58
	NM_168033.3	NP_728888.1	10 - 11	1749	58
	NM_168034.3	NP_728889.1	10 - 11	1468	58
	NM_168035.2	NP_728890.1	9 - 10	1687	58
	NM_168036.3	NP_728891.1	9 - 10	1659	58
GenBank mRNA	AF152398.1	-	9 - 10	2408	58
	AF152399.1	-	8 - 9	2369	58
	AF152400.1	-	10 - 11	1817	58
	AF152401.1	-	10 - 11	1724	58
	AF152402.1	-	9 - 10	1685	58
	AF152403.1	-	9 - 10	1393	58
	AF152404.1	-	11 - 12	1507	58
	AF152405.1	-	9 - 10	2098	58
	AF152406.1	-	10 - 11	1694	58
	BT010064.1	-	8 - 9	1565	58
	BT022123.1	-	-	1659	58