Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: f-cup
Entrez Gene ID: 41677
Gene Name: flyers-cup
Gene Aliases: BcDNA:GH09045, CG9611, Dmel\CG9611, Dmel_CG9611
Chromosome Location: Chr.3R: 13695263 - 13700838 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID): FBgn0028487

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001104302.2	NP_001097772.1	8 - 9	1781	72
	NM_001104303.2	NP_001097773.1	6 - 7	908	72
	NM_001104304.2	NP_001097774.1	5 - 6	925	72
	NM_001275615.1	NP_001262544.1	7 - 8	1264	72
	NM_001275616.1	NP_001262545.1	5 - 6	1176	72
	NM_001275617.1	NP_001262546.1	5 - 6	1176	72
	NM_001275618.1	NP_001262547.1	6 - 7	1693	72
	NM_142049.3	NP_650306.1	5 - 6	1176	72
	NM_169550.2	NP_731852.2	7 - 8	1264	72
GenBank mRNA	AF184226.1	-	5 - 6	1148	72
GenBank mRNA	BT012334.1	-	8 - 9	1730	72