Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: f-cup
Entrez Gene ID: 41677
Gene Name: flyers-cup
Gene Aliases: BcDNA:GH09045, CG9611, Dmel\CG9611, Dmel_CG9611
Chromosome Location: Chr.3R: 13695263 - 13700838 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID): FBgn0028487

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001104302.2	NP_001097772.1	11 - 12	2654	90
	NM_001104303.2	NP_001097773.1	9 - 10	1779	90
	NM_001104304.2	NP_001097774.1	7 - 8	1466	90
	NM_001275615.1	NP_001262544.1	10 - 11	2132	90
	NM_001275616.1	NP_001262545.1	8 - 9	2044	90
	NM_001275617.1	NP_001262546.1	8 - 9	2042	90
	NM_001275618.1	NP_001262547.1	9 - 10	2566	90
	NM_142049.3	NP_650306.1	7 - 8	1717	90
	NM_169550.2	NP_731852.2	9 - 10	1805	90
GenBank mRNA	AF184226.1	-	7 - 8	1689	90
GenBank mRNA	BT012334.1	-	11 - 12	2603	90