Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: PRPF40A
Entrez Gene ID: 55660
Gene Name: pre-mRNA processing factor 40 homolog A
Gene Aliases: FBP-11, FBP11, FLAF1, FNBP3, HIP-10, HIP10, HYPA, NY-REN-6, Prp40
Chromosome Location: Chr.2: 152651593 - 152718007 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_017892.3	NP_060362.3	11 - 12	1167	117
	XM_005246676.4	XP_005246733.3	11 - 12	1687	117
	XM_005246677.4	XP_005246734.2	11 - 12	1163	117
	XM_011511446.2	XP_011509748.1	10 - 11	1633	117
	XM_011511447.2	XP_011509749.1	11 - 12	1687	117
	XM_011511448.2	XP_011509750.1	10 - 11	1109	117
	XM_011511449.2	XP_011509751.1	13 - 14	1517	117
	XM_017004453.1	XP_016859942.1	11 - 12	1687	117
	XM_017004454.1	XP_016859943.1	10 - 11	1633	117
	XM_017004455.1	XP_016859944.1	10 - 11	1109	117
	XM_017004456.1	XP_016859945.1	12 - 13	1353	117
	XM_017004457.1	XP_016859946.1	13 - 14	1516	117
	XM_017004458.1	XP_016859947.1	11 - 12	1263	117
	XM_017004459.1	XP_016859948.1	11 - 12	1372	117
	XM_017004460.1	XP_016859949.1	11 - 12	1300	117
	XM_017004461.1	XP_016859950.1	11 - 12	1372	117
GenBank mRNA	AF049523.1	-	11 - 12	1152	117
	AF049528.1	-	11 - 12	1239	117
	AK024810.1	-	12 - 13	1486	117
	AK298547.1	-	8 - 9	1004	117
	BC000273.1	-	11 - 12	1130	117
	BC011788.2	-	11 - 12	1151	117
	BC029414.1	-	11 - 12	1167	117