Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
COL2A1
Entrez Gene ID
1280
Gene Name
collagen type II alpha 1 chain
Gene Aliases
ANFH, AOM, COL11A3, SEDC, STL1
Chromosome Location
Chr.12: 47972965 - 48006212 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001844.4 NP_001835.3 42 - 43 3074 97
NM_033150.2 NP_149162.2 41 - 42 2867 97
XM_017018828.1 XP_016874317.1 44 - 45 3159 97
XM_017018829.1 XP_016874318.1 44 - 45 3156 97
XM_017018830.1 XP_016874319.1 43 - 44 2949 97
XM_017018831.1 XP_016874320.1 42 - 43 4459 97
GenBank mRNA AL834148.1 - 25 - 26 1979 97
BC116449.1 - 42 - 43 2895 97
X13783.1 - 20 - 21 1393 97
X16468.1 - 41 - 42 2686 97
X16711.1 - 41 - 42 2686 97

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