Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol: CD44
Entrez Gene ID: 960
Gene Name: CD44 molecule (Indian blood group)
Gene Aliases: CDW44, CSPG8, ECMR-III, HCELL, HUTCH-I, IN, LHR, MC56, MDU2, MDU3, MIC4, Pgp1
Chromosome Location: Chr.11: 35138870 - 35232402 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_000610.3	NP_000601.3	12 - 13	1946	78
	NM_001001389.1	NP_001001389.1	11 - 12	1817	78
	NM_001001390.1	NP_001001390.1	6 - 7	1199	78
	XM_005253231.2	XP_005253288.1	12 - 13	1676	78
	XM_005253232.2	XP_005253289.1	12 - 13	1673	78
	XM_005253233.2	XP_005253290.1	11 - 12	1556	78
	XM_005253234.2	XP_005253291.1	11 - 12	1553	78
	XM_005253235.2	XP_005253292.1	11 - 12	1547	78
	XM_005253238.2	XP_005253295.1	8 - 9	1187	78
	XM_005253239.2	XP_005253296.1	8 - 9	1181	78
	XM_005253240.2	XP_005253297.1	7 - 8	1052	78
	XM_006718388.1	XP_006718451.1	12 - 13	1670	78
	XM_011520482.1	XP_011518784.1	12 - 13	1676	78
	XM_011520483.1	XP_011518785.1	10 - 11	1421	78
	XM_011520484.1	XP_011518786.1	10 - 11	1418	78
	XM_011520485.1	XP_011518787.1	10 - 11	1415	78
	XM_011520486.1	XP_011518788.1	7 - 8	1058	78
	XM_011520488.1	XP_011518790.1	6 - 7	926	78
	XM_017018583.1	XP_016874072.1	11 - 12	1544	78
GenBank mRNA	AJ251595.1	-	12 - 13	1690	78
	AK304467.1	-	2 - 3	306	78
	AK307707.1	-	2 - 3	264	78
	AY101192.1	-	6 - 7	881	78
	BC004372.1	-	11 - 12	1514	78
	BF828674.1	-	2 - 3		78
	BG946113.1	-	2 - 3	192	78
	M83326.1	-	1 - 2	117	78
	M83327.1	-	3 - 4	243	78
	M83328.1	-	3 - 4	249	78
	S66400.1	-	6 - 7	815	78
	X55150.1	-	6 - 7	888	78
	X55938.1	-	2 - 3	216	78
	X56794.1	-	6 - 7	880	78
	X62739.1	-	6 - 7	716	78
	X66733.1	-	11 - 12	1512	78