Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
COL16A1
Entrez Gene ID
1307
Gene Name
collagen type XVI alpha 1 chain
Gene Aliases
447AA, FP1572
Chromosome Location
Chr.1: 31652247 - 31704167 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001856.3 NP_001847.3 57 - 58 3992 97
XM_005270481.1 XP_005270538.1 56 - 57 3939 97
XM_011540722.1 XP_011539024.1 56 - 57 3942 97
XM_011540723.1 XP_011539025.1 55 - 56 3894 97
XM_011540724.1 XP_011539026.1 56 - 57 3864 97
XM_011540726.2 XP_011539028.1 52 - 53 3410 97
XM_011540727.2 XP_011539029.1 47 - 48 2748 97
XM_011540728.2 XP_011539030.1 35 - 36 2230 97
XM_017000338.1 XP_016855827.1 56 - 57 3954 97
XM_017000339.1 XP_016855828.1 56 - 57 3951 97
XM_017000340.1 XP_016855829.1 34 - 35 2193 97
XM_017000341.1 XP_016855830.1 34 - 35 1983 97
GenBank mRNA AB209571.1 - 51 - 52 3206 97
AF370368.1 - 1 - 2 874 97
M92642.1 - 58 - 59 3777 97
S57132.1 - 40 - 41 2373 97

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