Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
PTPRD
Entrez Gene ID
5789
Gene Name
protein tyrosine phosphatase, receptor type D
Gene Aliases
HPTP, HPTPD, HPTPDELTA, PTPD, RPTPDELTA
Chromosome Location
Chr.9: 8314246 - 10612840 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001040712.2 NP_001035802.1 24 - 25 3817 70
NM_001171025.1 NP_001164496.1 23 - 24 3826 70
NM_002839.3 NP_002830.1 40 - 41 5687 70
NM_130391.3 NP_569075.2 25 - 26 3826 70
NM_130392.3 NP_569076.2 25 - 26 3829 70
NM_130393.3 NP_569077.2 23 - 24 3799 70
XM_006716817.3 XP_006716880.1 41 - 42 6036 70
XM_006716823.2 XP_006716886.1 39 - 40 5982 70
XM_006716825.3 XP_006716888.1 39 - 40 5981 70
XM_006716827.3 XP_006716890.1 36 - 37 5921 70
XM_006716832.3 XP_006716895.1 33 - 34 4752 70
XM_006716833.3 XP_006716896.1 35 - 36 4754 70
XM_006716834.3 XP_006716897.1 33 - 34 4755 70
XM_006716835.3 XP_006716898.1 34 - 35 4745 70
XM_006716837.3 XP_006716900.1 33 - 34 4725 70
XM_006716838.3 XP_006716901.1 33 - 34 4724 70
XM_006716839.3 XP_006716902.1 32 - 33 4710 70
XM_011517992.2 XP_011516294.1 39 - 40 5978 70
XM_017014958.1 XP_016870447.1 41 - 42 6044 70
XM_017014959.1 XP_016870448.1 42 - 43 6116 70
XM_017014960.1 XP_016870449.1 40 - 41 6005 70
XM_017014961.1 XP_016870450.1 40 - 41 5989 70
XM_017014962.1 XP_016870451.1 32 - 33 5177 70
XM_017014963.1 XP_016870452.1 41 - 42 6041 70
XM_017014964.1 XP_016870453.1 41 - 42 6040 70
XM_017014965.1 XP_016870454.1 41 - 42 6043 70
XM_017014966.1 XP_016870455.1 40 - 41 6035 70
XM_017014967.1 XP_016870456.1 40 - 41 6030 70
XM_017014968.1 XP_016870457.1 40 - 41 6026 70
XM_017014969.1 XP_016870458.1 40 - 41 6026 70
XM_017014970.1 XP_016870459.1 40 - 41 6026 70
XM_017014971.1 XP_016870460.1 39 - 40 6015 70
XM_017014972.1 XP_016870461.1 40 - 41 6017 70
XM_017014973.1 XP_016870462.1 39 - 40 6011 70
XM_017014974.1 XP_016870463.1 40 - 41 6014 70
XM_017014975.1 XP_016870464.1 38 - 39 6000 70
XM_017014976.1 XP_016870465.1 40 - 41 5999 70
XM_017014977.1 XP_016870466.1 39 - 40 6000 70
XM_017014978.1 XP_016870467.1 40 - 41 5996 70
XM_017014979.1 XP_016870468.1 40 - 41 5995 70
XM_017014980.1 XP_016870469.1 38 - 39 5951 70
XM_017014981.1 XP_016870470.1 35 - 36 5907 70
XM_017014982.1 XP_016870471.1 36 - 37 4807 70
XM_017014983.1 XP_016870472.1 36 - 37 4804 70
XM_017014984.1 XP_016870473.1 35 - 36 4795 70
XM_017014985.1 XP_016870474.1 35 - 36 4789 70
XM_017014986.1 XP_016870475.1 35 - 36 4785 70
XM_017014987.1 XP_016870476.1 34 - 35 4770 70
XM_017014988.1 XP_016870477.1 34 - 35 4767 70
XM_017014989.1 XP_016870478.1 35 - 36 4761 70
XM_017014990.1 XP_016870479.1 35 - 36 4757 70
XM_017014991.1 XP_016870480.1 35 - 36 4757 70
XM_017014992.1 XP_016870481.1 34 - 35 4748 70
XM_017014993.1 XP_016870482.1 34 - 35 4743 70
XM_017014994.1 XP_016870483.1 34 - 35 4740 70
XM_017014995.1 XP_016870484.1 34 - 35 4746 70
GenBank mRNA AB208869.1 - 23 - 24 3643 70
AB211400.1 - 39 - 40 5655 70
AK296392.1 - 8 - 9 1084 70
BC106713.1 - 23 - 24 3774 70
BC106714.1 - 25 - 26 3777 70
BC106715.2 - 25 - 26 3774 70
BC106716.1 - 23 - 24 3747 70
L38929.1 - 30 - 31 5097 70
X54133.1 - 20 - 21 3777 70

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