Assay Design
The assay primers and probes lie within a single exon. This assay will detect gDNA.
Gene Transcripts
- Gene Symbol
- SNORD117
- Entrez Gene ID
-
692233
- Gene Name
- small nucleolar RNA, C/D box 117
- Gene Aliases
-
U83
- Chromosome Location
-
Chr.6: 31536374 - 31536449 on Build GRCh38
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
Amplicon Length |
| RefSeq |
NR_003140.1 |
|
1 - 1 |
43 |
70 |
| GenBank mRNA |
AJ243200.1 |
- |
1 - 1 |
43 |
70 |
Non Gene Transcripts
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
IMAGE Clone ID |
Transcript Location |
Amplicon Length |
| GenBankmRNA |
DB234408.1 |
- |
2 |
372 |
|
Chr. 6 - 31536297 - 31538854 [-] on Build GRCh38 |
70 |
Adjacent Gene Details
|
Gene Name |
Gene Symbol |
Alias |
Distance |
Relative Direction |
Location Chromosome |
| Upstream |
ATP6V1G2-DDX39B readthrough (NMD candidate) |
ATP6V1G2-DDX39B |
|
|
Sense |
Chr. - 31530219 - 31546848 on Build GRCh38 |
| Downstream |
small nucleolar RNA, C/D box 84 |
SNORD84 |
U84 |
4.7kb
|
Sense |
Chr. - 31541101 - 31541178 on Build GRCh38 |
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