Assay Design
The assay primers and probes lie within a single exon. This assay will detect gDNA.
Gene Transcripts
- Gene Symbol
- SNORA3B
- Entrez Gene ID
-
677826
- Gene Name
- small nucleolar RNA, H/ACA box 3B
- Gene Aliases
-
ACA3-2, SNORA45, SNORA45B
- Chromosome Location
-
Chr.11: 8685439 - 8685569 on Build GRCh38
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
Amplicon Length |
| RefSeq |
NR_002977.1 |
|
1 - 1 |
70 |
113 |
| GenBank mRNA |
AM055744.1 |
- |
1 - 1 |
70 |
113 |
Non Gene Transcripts
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
IMAGE Clone ID |
Transcript Location |
Amplicon Length |
| GenBankmRNA |
CA448097.1 |
- |
1 |
|
|
Chr. 11 - 8685159 - 8685846 [-] on Build GRCh38 |
113 |
| GenBankmRNA |
CB128844.1 |
- |
1 |
|
|
Chr. 11 - 8685171 - 8685746 [+] on Build GRCh38 |
112 |
| GenBankmRNA |
BM970456.1 |
- |
1 |
|
|
Chr. 11 - 8685175 - 8685846 [-] on Build GRCh38 |
113 |
| GenBankmRNA |
DW441139.1 |
- |
1 |
86 |
|
Chr. 11 - 8685439 - 8685802 [+] on Build GRCh38 |
113 |
| GenBankmRNA |
AJ713230.1 |
- |
1 |
97 |
|
Chr. 11 - 8685412 - 8685760 [+] on Build GRCh38 |
113 |
Adjacent Gene Details
|
Gene Name |
Gene Symbol |
Alias |
Distance |
Relative Direction |
Location Chromosome |
| Upstream |
small nucleolar RNA, H/ACA box 3A |
SNORA3A |
ACA3, SNORA3, SNORA45A |
-1.1kb
|
Sense |
Chr. - 8684227 - 8684356 on Build GRCh38 |
| Downstream |
suppression of tumorigenicity 5 |
ST5 |
DENND2B, HTS1, p126 |
7.8kb
|
Anti-sense |
Chr. - 8693352 - 8910951 on Build GRCh38 |
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