Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: C1orf52
Entrez Gene ID: 148423
Gene Name: chromosome 1 open reading frame 52
Gene Aliases: gm117
Chromosome Location: Chr.1: 85249953 - 85259672 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NR_024113.1		1 - 2	319	69
GenBank mRNA	AF387612.1	-	1 - 2	280	69
	AK126929.1	-	1 - 2	319	69
	AY486332.1	-	1 - 2	289	69
	DA214065.1	-	1 - 2	319	69

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BX646292.1	-	1 - 2	290		Chr. 1 - 85258627 - 85259642 [-] on Build GRCh38	69
GenBankmRNA	DA228961.1	-	1 - 2	299		Chr. 1 - 85258577 - 85259652 [-] on Build GRCh38	69
GenBankmRNA	HY111304.1	-	1 - 2	302		Chr. 1 - 85258616 - 85259655 [-] on Build GRCh38	69
GenBankmRNA	CD384885.1	-	1 - 2	323		Chr. 1 - 85252504 - 85259657 [-] on Build GRCh38	69

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	synapse defective Rho GTPase homolog 2	SYDE2		-57.2kb	Sense	Chr. - 85157673 - 85201725 on Build GRCh38
Downstream	B-cell CLL/lymphoma 10	BCL10	CARMEN, CIPER, CLAP, IMD37, c-E10, mE10	6.1kb	Sense	Chr. - 85265776 - 85276904 on Build GRCh38

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