Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
CELF3
Entrez Gene ID
11189
Gene Name
CUGBP, Elav-like family member 3
Gene Aliases
BRUNOL1, CAGH4, ERDA4, ETR-1, TNRC4
Chromosome Location
Chr.1: 151700058 - 151716821 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001172648.3 NP_001166119.1 13 - 13 5128 100
NM_001172649.3 NP_001166120.1 12 - 12 5225 100
NM_001291106.1 NP_001278035.1 13 - 13 5372 100
NM_001291107.1 NP_001278036.1 13 - 13 5372 100
NM_007185.6 NP_009116.3 13 - 13 5375 100
XM_006711139.2 XP_006711202.1 14 - 14 4603 100
XM_006711141.2 XP_006711204.1 14 - 14 4600 100
XM_011509111.2 XP_011507413.1 12 - 12 5070 100
XM_011509112.2 XP_011507414.1 12 - 12 4466 100
XM_011509114.2 XP_011507416.1 12 - 12 4434 100
XM_017000145.1 XP_016855634.1 12 - 12 4441 100
XM_017000146.1 XP_016855635.1 12 - 12 4438 100
GenBank mRNA AK123206.1 - 1 - 1 2151 100
BM680140.1 - 1 - 1 100


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BP394901.1 - 1 359 Chr. 1 - 151700058 - 151700639 [-] on Build GRCh38 100
GenBankmRNA DB294995.1 - 1 Chr. 1 - 151700060 - 151700465 [+] on Build GRCh38 100
GenBankmRNA DB301268.1 - 1 Chr. 1 - 151700060 - 151700581 [+] on Build GRCh38 100
GenBankmRNA BM676034.1 - 1 Chr. 1 - 151700058 - 151700655 [+] on Build GRCh38 100


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream sorting nexin family member 27 SNX27 MRT1, MY014 -977.0 Anti-sense Chr. - 151612027 - 151699083 on Build GRCh38
Downstream regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1 RIIAD1 C1orf230, NCRNA00166 19.1kb Anti-sense Chr. - 151721537 - 151729606 on Build GRCh38

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