Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: STAT3
Entrez Gene ID: 6774
Gene Name: signal transducer and activator of transcription 3
Gene Aliases: ADMIO, ADMIO1, APRF, HIES
Chromosome Location: Chr.17: 42313324 - 42388505 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
GenBank mRNA	BC029783.1	-	1 - 1	1344	106

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AI867300.1	-	1			Chr. 17 - 42387035 - 42387428 [+] on Build GRCh38	106
GenBankmRNA	BU198367.1	-	1	351		Chr. 17 - 42386875 - 42387425 [-] on Build GRCh38	106
GenBankmRNA	BF508977.1	-	1			Chr. 17 - 42387033 - 42387462 [+] on Build GRCh38	106
GenBankmRNA	BG617189.1	-	1	546		Chr. 17 - 42386834 - 42387623 [-] on Build GRCh38	106
GenBankmRNA	AI862465.1	-	1			Chr. 17 - 42387035 - 42387428 [+] on Build GRCh38	106

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	signal transducer and activator of transcription 5A	STAT5A	MGF, STAT5	-75.0kb	Anti-sense	Chr. - 42287547 - 42311943 on Build GRCh38
Downstream	polymerase I and transcript release factor	PTRF	CAVIN, CAVIN1, CGL4, FKSG13, cavin-1	14.0kb	Sense	Chr. - 42402449 - 42423320 on Build GRCh38

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