Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
ATP23
Entrez Gene ID
91419
Gene Name
ATP23 metallopeptidase and ATP synthase assembly factor homolog
Gene Aliases
KUB3, XRCC6BP1
Chromosome Location
Chr.12: 57941504 - 57957269 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001320408.1 NP_001307337.1 1 - 1 109 90
NM_001320409.1 NP_001307338.1 1 - 1 109 90
NM_001320410.1 NP_001307339.1 1 - 1 109 90
NM_033276.3 NP_150592.1 1 - 1 109 90
GenBank mRNA BC033881.1 - 1 - 1 49 90
BM544500.1 - 1 - 1 68 90
BU601924.1 - 1 - 1 112 90
DA711361.1 - 1 - 1 72 90


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DB001162.1 - 1 56 Chr. 12 - 57941557 - 57942115 [+] on Build GRCh38 90
GenBankmRNA BQ437666.1 - 1 50 Chr. 12 - 57941563 - 57956849 [+] on Build GRCh38 90
GenBankmRNA BI825524.1 - 1 93 Chr. 12 - 57941520 - 57956863 [+] on Build GRCh38 90
GenBankmRNA HY042462.1 - 1 63 Chr. 12 - 57941550 - 57947080 [+] on Build GRCh38 90
GenBankmRNA BM554419.1 - 1 49 Chr. 12 - 57941564 - 57942316 [+] on Build GRCh38 90
GenBankmRNA DB455081.1 - 1 97 Chr. 12 - 57941516 - 57947062 [+] on Build GRCh38 90
GenBankmRNA BF966159.1 - 1 60 Chr. 12 - 57941554 - 57956724 [+] on Build GRCh38 90
GenBankmRNA HY002889.1 - 1 82 Chr. 12 - 57941533 - 57941805 [+] on Build GRCh38 90
GenBankmRNA DB453276.1 - 1 87 Chr. 12 - 57941527 - 57947080 [+] on Build GRCh38 90


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream uncharacterized LOC100506844 LOC100506844 -5.4kb Anti-sense Chr. - 57931449 - 57936164 on Build GRCh38
Downstream uncharacterized LOC105369785 LOC105369785 145.6kb Sense Chr. - 58087892 - 58093362 on Build GRCh38

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