Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
KCNB1
Entrez Gene ID
3745
Gene Name
potassium voltage-gated channel subfamily B member 1
Gene Aliases
DRK1, Kv2.1
Chromosome Location
Chr.20: 49363877 - 49484033 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_004975.3 NP_004966.1 2 - 2 11618 76
XM_006723784.3 XP_006723847.1 3 - 3 11712 76
XM_011528799.2 XP_011527101.1 3 - 3 11741 76
GenBank mRNA AK126976.1 - 1 - 1 3651 76


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BM703844.1 - 1 278 Chr. 20 - 49363912 - 49364370 [-] on Build GRCh38 76
GenBankmRNA BU728497.1 - 1 Chr. 20 - 49363877 - 49364414 [+] on Build GRCh38 76
GenBankmRNA BU736654.1 - 1 Chr. 20 - 49363877 - 49364406 [+] on Build GRCh38 76
GenBankmRNA BM685769.1 - 180 Chr. - - [-] on Build 76
GenBankmRNA DB305167.1 - 1 Chr. 20 - 49363886 - 49364430 [+] on Build GRCh38 76
GenBankmRNA DB304144.1 - 1 Chr. 20 - 49363879 - 49364374 [+] on Build GRCh38 76
GenBankmRNA BM704484.1 - 1 298 Chr. 20 - 49363880 - 49364403 [-] on Build GRCh38 76
GenBankmRNA AI057291.1 - 1 Chr. 20 - 49363880 - 49364278 [+] on Build GRCh38 76
GenBankmRNA BX119683.1 - 1 271 Chr. 20 - 49363877 - 49364376 [-] on Build GRCh38 76
GenBankmRNA BM668821.1 - 1 Chr. 20 - 49363877 - 49364370 [+] on Build GRCh38 76


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream ZNFX1 antisense RNA 1 ZFAS1 C20orf199, HSUP1, HSUP2, NCRNA00275, ZNFX1-AS1 -74.6kb Anti-sense Chr. - 49278178 - 49289260 on Build GRCh38
Downstream prostaglandin I2 (prostacyclin) synthase PTGIS CYP8, CYP8A1, PGIS, PTGI 136.1kb Sense Chr. - 49503874 - 49568170 on Build GRCh38

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