Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
G3BP1
Entrez Gene ID
10146
Gene Name
G3BP stress granule assembly factor 1
Gene Aliases
G3BP, HDH-VIII
Chromosome Location
Chr.5: 151771915 - 151811352 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq XM_006714749.3 XP_006714812.1 12 - 12 5868 100
XM_006714750.3 XP_006714813.1 12 - 12 5807 100
XM_017008922.1 XP_016864411.1 12 - 12 6154 100
XM_017008923.1 XP_016864412.1 12 - 12 6123 100
GenBank mRNA AK128316.1 - 1 - 1 1645 100


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA CN371112.1 - 1 522 Chr. 5 - 151807877 - 151808536 [+] on Build GRCh38 100
GenBankmRNA AL597049.1 - 1 282 Chr. 5 - 151808117 - 151808584 [+] on Build GRCh38 100
GenBankmRNA DB161907.1 - 1 211 Chr. 5 - 151808189 - 151808584 [+] on Build GRCh38 100
GenBankmRNA DB229969.1 - 1 436 Chr. 5 - 151807963 - 151808487 [+] on Build GRCh38 100
GenBankmRNA DB142911.1 - 1 470 Chr. 5 - 151807930 - 151808459 [+] on Build GRCh38 100
GenBankmRNA AL597050.1 - 1 282 Chr. 5 - 151808117 - 151808659 [+] on Build GRCh38 100
GenBankmRNA BU934471.1 - 1 54 Chr. 5 - 151808347 - 151808994 [+] on Build GRCh38 100
GenBankmRNA DB156277.1 - 1 109 Chr. 5 - 151808290 - 151808838 [+] on Build GRCh38 100
GenBankmRNA DB132765.1 - 1 438 Chr. 5 - 151807962 - 151808506 [+] on Build GRCh38 100
GenBankmRNA DA453227.1 - 1 197 Chr. 5 - 151808206 - 151808790 [+] on Build GRCh38 100
GenBankmRNA AW753131.1 - 1 175 Chr. 5 - 151808223 - 151808741 [+] on Build GRCh38 100
GenBankmRNA DA413530.1 - 1 338 Chr. 5 - 151808061 - 151808620 [+] on Build GRCh38 100


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream uncharacterized LOC100652758 LOC100652758 -35.2kb Anti-sense Chr. - 151769793 - 151772176 on Build GRCh38
Downstream glycine receptor alpha 1 GLRA1 HKPX1, STHE 11.2kb Anti-sense Chr. - 151820798 - 151924836 on Build GRCh38

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