Product Details

Assay Reference Genome
Location

Chr.20:56428544 on build GRCh38
Cytoband
20q13.31
Species
Homo sapiens
Variation Type
Copy Number

Additional Information

For this assay, SNP(s) [rs79197736] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Target Gene Details

Entrez Gene ID
57091
Gene Symbol
CASS4
Gene Name
Cas scaffolding protein family member 4
Gene Aliases
C20orf32, CAS4, HEFL, HEPL
Location
Chr.20:56411550-56460240 on build GRCh38
Assay Gene Location
Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Location Protein ID
CASS4 NM_001164114.1 NP_001157586.1
NM_001164115.1 NP_001157587.1
NM_001164116.1 NP_001157588.1
NM_020356.3 NP_065089.2
XM_006723831.3 XP_006723894.1
AJ276678.1 CAC00655.1
AK027760.1 BAB55351.1
AK295613.1
AK308057.1
AK314653.1
BC027951.1 AAH27951.1
BX280195.1
DA584687.1

Target Copy Number Variation Details

DGV Version
Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv525425 Chr20:56403979 - 56897294 on Build GRCh38 Gain GCNT7 CASS4 TFAP2C FAM209A LOC105372682 RTFDC1 CSTF1 FAM209B
nsv834013 Chr20:56307279 - 56476126 on Build GRCh38 Gain FAM210B CASS4 RTFDC1 CSTF1 AURKA
nsv518442 Chr20:56414270 - 56429946 on Build GRCh38 Gain CASS4

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