Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
Hoxa11os
Entrez Gene ID
15397
Gene Name
homeobox A11, opposite strand
Gene Aliases
Hoxa11as, Hoxa11s
Chromosome Location
Chr.6: 52245243 - 52249769 on Build GRCm38
Interrogated Sequence Translated Protein RNADB ID Exon Boundary Assay Location Amplicon Length
GenBank mRNA U20367.1 - LIT1564
Hoxa11as
1 - 2 575 72


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BQ964700.1 - 1 - 2 634 Chr. 6 - 52245052 - 52249256 [+] on Build GRCm38 72
GenBankmRNA CB952841.1 - 1 - 2 260 Chr. 6 - 52245398 - 52249418 [+] on Build GRCm38 72


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream homeobox A11 Hoxa11 Hox-1.9, Hoxa-11 Anti-sense Chr. - 52242105 - 52245810 on Build GRCm38
Downstream homeobox A13 Hoxa13 Hd, Hox-1.10 12.0kb Anti-sense Chr. - 52258853 - 52260880 on Build GRCm38

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