Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
Trpt1
Entrez Gene ID
107328
Gene Name
tRNA phosphotransferase 1
Gene Aliases
AU079016, AW045591, Tpt1, Tpt1h
Chromosome Location
Chr.19: 6996131 - 6999048 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NR_027351.1 2 - 3 472 78
GenBank mRNA AK038830.1 - 2 - 3 474 78
AK141582.1 - - 429 78


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA W65960.1 - 46 Chr. - - [-] on Build 78
GenBankmRNA CX218550.1 - 2 - 3 431 Chr. 19 - 6996172 - 6998758 [+] on Build GRCm38 78
GenBankmRNA AI430610.1 - 1 - 2 46 Chr. 19 - 6996728 - 6998933 [+] on Build GRCm38 78
GenBankmRNA BE627592.1 - 2 - 3 335 Chr. 19 - 6996268 - 6998525 [+] on Build GRCm38 78
GenBankmRNA CJ168896.1 - 2 - 3 379 Chr. 19 - 6996227 - 6998239 [+] on Build GRCm38 78


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream nudix (nucleoside diphosphate linked moiety X)-type motif 22 Nudt22 0610006K04Rik, AI851793, AW545547 -581.0 Anti-sense Chr. - 6993019 - 6996115 on Build GRCm38
Downstream fermitin family homolog 3 (Drosophila) Fermt3 C79673, Kindlin3 592.0 Anti-sense Chr. - 6998958 - 7019469 on Build GRCm38

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