Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: Bnc2
Entrez Gene ID: 242509
Gene Name: basonuclin 2
Gene Aliases: 5031434M05Rik, 8430420F16Rik
Chromosome Location: Chr.4: 84266804 - 84676342 on Build GRCm38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_172870.4	NP_766458.3	6 - 6	5512	68
GenBank mRNA	AK018429.1	-	1 - 1	450	68

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	CA983934.1	-	1	422		Chr. 4 - 84273055 - 84273904 [-] on Build GRCm38	68
GenBankmRNA	BB620417.1	-	1	448		Chr. 4 - 84273282 - 84273931 [-] on Build GRCm38	68
GenBankmRNA	CN533598.1	-	1	437		Chr. 4 - 84273248 - 84273919 [-] on Build GRCm38	68

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	coiled-coil domain containing 171	Ccdc171	4930418J05Rik, 4930473A06Rik, A330015D16Rik	-407.1kb	Anti-sense	Chr. - 83525537 - 83866143 on Build GRCm38
Downstream	centlein, centrosomal protein	Cntln	AI448092, B430108F07Rik, D530005L17Rik	609.6kb	Anti-sense	Chr. - 84883512 - 85131923 on Build GRCm38

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