Product Details

SNP ID

rs148583159

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.10:30845284 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

AGCTGCCTTTTCAGTCTTGGACATG[C/T]ATGTGATTCCTCGGAGGAGGAATGA

Phenotype

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

ZNF438 PubMed Links

Additional Information

For this assay, SNP(s) [rs3740236] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

ZNF438

Gene Name

zinc finger protein 438

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001143766.1	2639	Missense Mutation	ACA,GCA	T722A	NP_001137238.1
NM_001143767.1	2639	Missense Mutation	ACA,GCA	T722A	NP_001137239.1
NM_001143768.1	2639	Missense Mutation	ACA,GCA	T722A	NP_001137240.1
NM_001143769.1	2639	Missense Mutation	ACA,GCA	T673A	NP_001137241.1
NM_001143770.1	2639	Missense Mutation	ACA,GCA	T712A	NP_001137242.1
NM_001143771.1	2639	Missense Mutation	ACA,GCA	T712A	NP_001137243.1
NM_182755.2	2639	Missense Mutation	ACA,GCA	T722A	NP_877432.1
XM_006717393.3	2639	Missense Mutation	ACA,GCA	T722A	XP_006717456.1
XM_006717396.3	2639	Missense Mutation	ACA,GCA	T722A	XP_006717459.1
XM_006717398.3	2639	Missense Mutation	ACA,GCA	T712A	XP_006717461.1
XM_006717399.3	2639	Missense Mutation	ACA,GCA	T712A	XP_006717462.1
XM_011519371.2	2639	Missense Mutation	ACA,GCA	T722A	XP_011517673.1
XM_011519372.2	2639	Missense Mutation	ACA,GCA	T722A	XP_011517674.1
XM_011519373.2	2639	Missense Mutation	ACA,GCA	T722A	XP_011517675.1
XM_011519374.2	2639	Missense Mutation	ACA,GCA	T722A	XP_011517676.1
XM_011519376.2	2639	Missense Mutation	ACA,GCA	T712A	XP_011517678.1
XM_011519377.2	2639	Missense Mutation	ACA,GCA	T712A	XP_011517679.1
XM_017015863.1	2639	Missense Mutation	ACA,GCA	T733A	XP_016871352.1
XM_017015864.1	2639	Missense Mutation	ACA,GCA	T722A	XP_016871353.1
XM_017015865.1	2639	Missense Mutation	ACA,GCA	T722A	XP_016871354.1
XM_017015866.1	2639	Missense Mutation	ACA,GCA	T722A	XP_016871355.1
XM_017015867.1	2639	Missense Mutation	ACA,GCA	T722A	XP_016871356.1
XM_017015868.1	2639	Missense Mutation	ACA,GCA	T722A	XP_016871357.1
XM_017015869.1	2639	Missense Mutation	ACA,GCA	T722A	XP_016871358.1
XM_017015870.1	2639	Missense Mutation	ACA,GCA	T722A	XP_016871359.1
XM_017015871.1	2639	Missense Mutation	ACA,GCA	T722A	XP_016871360.1
XM_017015872.1	2639	Missense Mutation	ACA,GCA	T722A	XP_016871361.1
XM_017015873.1	2639	Missense Mutation	ACA,GCA	T712A	XP_016871362.1
XM_017015874.1	2639	Missense Mutation	ACA,GCA	T712A	XP_016871363.1
XM_017015875.1	2639	Missense Mutation	ACA,GCA	T286A	XP_016871364.1
XM_017015876.1	2639	Missense Mutation	ACA,GCA	T286A	XP_016871365.1
XM_017015877.1	2639	Missense Mutation	ACA,GCA	T286A	XP_016871366.1
XM_017015878.1	2639	Missense Mutation	ACA,GCA	T286A	XP_016871367.1
XM_017015879.1	2639	Missense Mutation	ACA,GCA	T286A	XP_016871368.1
XM_017015880.1	2639	Missense Mutation	ACA,GCA	T286A	XP_016871369.1
XM_017015881.1	2639	Missense Mutation	ACA,GCA	T286A	XP_016871370.1
XM_017015882.1	2639	Missense Mutation	ACA,GCA	T286A	XP_016871371.1

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