Product Details
- SNP ID
-
rs144586846
- Assay Type
- Functionally Tested
- NCBI dbSNP Submissions
-
NA
- Location
-
Chr.20:3228365 on Build GRCh38
- Set Membership
-
- Context Sequence [VIC/FAM]
- AGCAGCAGCTGAAGCACCTGCAGGC[C/T]CGTGAAGTAGTGGATCTTCCTCTGG
- Phenotype
-
MIM: 147520
MIM: 610206
- Polymorphism
- C/T, Transition Substitution
- Allele Nomenclature
-
- Literature Links
-
ITPA
PubMed Links
- Additional Information
-
For this assay, SNP(s) [rs58757394] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Gene Details
- Gene
- ITPA
- Gene Name
- inosine triphosphatase
- Gene
- SLC4A11
- Gene Name
- solute carrier family 4 member 11
Transcript Accession |
SNP Location |
SNP Type |
Codon Change |
Amino Acid Change |
Protein ID |
NM_001174089.1 |
2575 |
Missense Mutation |
AGC,GGC |
S818G |
NP_001167560.1 |
NM_001174090.1 |
2575 |
Missense Mutation |
AGC,GGC |
S861G |
NP_001167561.1 |
NM_032034.3 |
2575 |
Missense Mutation |
AGC,GGC |
S834G |
NP_114423.1 |
XM_005260856.4 |
2575 |
Missense Mutation |
AGC,GGC |
S941G |
XP_005260913.1 |
XM_005260857.1 |
2575 |
Missense Mutation |
AGC,GGC |
S799G |
XP_005260914.1 |
XM_011529383.2 |
2575 |
Missense Mutation |
AGC,GGC |
S807G |
XP_011527685.1 |
XM_011529384.1 |
2575 |
Missense Mutation |
AGC,GGC |
S799G |
XP_011527686.1 |
XM_011529385.1 |
2575 |
Missense Mutation |
AGC,GGC |
S799G |
XP_011527687.1 |
XM_017028093.1 |
2575 |
Missense Mutation |
AGC,GGC |
S939G |
XP_016883582.1 |
XM_017028094.1 |
2575 |
Missense Mutation |
AGC,GGC |
S799G |
XP_016883583.1 |
XM_017028095.1 |
2575 |
Missense Mutation |
AGC,GGC |
S780G |
XP_016883584.1 |
XM_017028096.1 |
2575 |
Missense Mutation |
AGC,GGC |
S799G |
XP_016883585.1 |
XM_017028097.1 |
2575 |
Intron |
|
|
XP_016883586.1 |
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