Product Details

SNP ID

rs190259697

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.10:84222111 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

ACCCACTTGCTGCAGCTGCAGGGGC[C/T]CTGGGCTGCCCAGGCATAGGCGCCC

Phenotype

MIM: 609502 MIM: 616103

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

CDHR1 PubMed Links

Additional Information

For this assay, SNP(s) [rs12218853,rs74145770] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CDHR1

Gene Name

cadherin related family member 1

There are no transcripts associated with this gene.

Gene

LRIT1

Gene Name

leucine rich repeat, Ig-like and transmembrane domains 1

There are no transcripts associated with this gene.

Gene

LRIT2

Gene Name

leucine rich repeat, Ig-like and transmembrane domains 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001017924.3	1531	Missense Mutation	AGC,GGC	S488G	NP_001017924.1
NM_001284223.1	1531	Missense Mutation	AGC,GGC	S498G	NP_001271152.1

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