Product Details

SNP ID

rs1865951

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.2:235506695 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TTAGGAGCCACCGGAAGCCGGGTCT[A/G]TATGGGCAGGGCCAGTGAGATGCAA

Phenotype

MIM: 608651

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

AGAP1 PubMed Links

Additional Information

For this assay, SNP(s) [rs76603796] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

AGAP1

Gene Name

ArfGAP with GTPase domain, ankyrin repeat and PH domain 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001037131.2		Intron			NP_001032208.1
NM_001244888.1		Intron			NP_001231817.1
NM_014914.4		Intron			NP_055729.2
XM_005246059.4		Intron			XP_005246116.1
XM_006712234.3		Intron			XP_006712297.1
XM_006712235.3		Intron			XP_006712298.1
XM_006712237.3		Intron			XP_006712300.2
XM_006712239.3		Intron			XP_006712302.2
XM_011510547.2		Intron			XP_011508849.1
XM_011510548.2		Intron			XP_011508850.1
XM_011510549.2		Intron			XP_011508851.1
XM_017003282.1		Intron			XP_016858771.1

Gene

AGAP1-IT1

Gene Name

AGAP1 intronic transcript 1

There are no transcripts associated with this gene.

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