Product Details

SNP ID

rs522587

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.6:10527720 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GGTAAGAGATACGTGTGTATGCATG[C/T]GTGTGTGTGAACGGACTTCTTGTTT

Phenotype

MIM: 600429

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

GCNT2 PubMed Links

Additional Information

For this assay, SNP(s) [rs141470231] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

GCNT2

Gene Name

glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001491.2		Intron			NP_001482.1
NM_145649.4		Intron			NP_663624.1
NM_145655.3		Intron			NP_663630.2
XM_005248997.3		Intron			XP_005249054.1
XM_005248999.2		Intron			XP_005249056.1
XM_006715052.3		Intron			XP_006715115.1
XM_011514466.2		Intron			XP_011512768.1
XM_011514468.2		Intron			XP_011512770.1
XM_017010732.1		Intron			XP_016866221.1

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