Product Details

SNP ID

rs4677

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.14:105250942 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

CCAGATCCCCTCCCAGTGGCACCCA[C/T]GCCACCTGCTTTGAGGGGTTGGATC

Phenotype

MIM: 604902

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

BRF1 PubMed Links

Additional Information

For this assay, SNP(s) [rs77631464] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

BRF1

Gene Name

BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001242786.1		Intron			NP_001229715.1
NM_001242787.1		Intron			NP_001229716.1
NM_001242788.1		Intron			NP_001229717.1
NM_001242789.1		Intron			NP_001229718.1
NM_001242790.1		Intron			NP_001229719.1
NM_001519.3		Intron			NP_001510.2
NM_145685.2		Intron			NP_663718.1
XM_005267561.3		Intron			XP_005267618.1
XM_005267563.3		Intron			XP_005267620.1
XM_006720123.2		Intron			XP_006720186.1
XM_011536672.2		Intron			XP_011534974.1
XM_011536673.1		Intron			XP_011534975.1
XM_011536674.1		Intron			XP_011534976.1

Gene

BTBD6

Gene Name

BTB domain containing 6

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_033271.2		Intron			NP_150374.2
XM_005268188.3		Intron			XP_005268245.1

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