Product Details

SNP ID

rs6451992

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.5:21751941 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

GTGAATCGTATGGTGGGGCAGTTGG[A/G]TCCACATCATTTTCCTGTAGCCTTT

Phenotype

MIM: 600562

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

CDH12 PubMed Links

Additional Information

For this assay, SNP(s) [rs6451993] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CDH12

Gene Name

cadherin 12

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001317227.1	2895	Silent Mutation	GAC,GAT	D727D	NP_001304156.1
NM_001317228.1	2895	Silent Mutation	GAC,GAT	D687D	NP_001304157.1
NM_004061.4	2895	Silent Mutation	GAC,GAT	D727D	NP_004052.2
XM_011513927.2	2895	Silent Mutation	GAC,GAT	D727D	XP_011512229.1
XM_017008920.1	2895	Silent Mutation	GAC,GAT	D727D	XP_016864409.1
XM_017008921.1	2895	Silent Mutation	GAC,GAT	D727D	XP_016864410.1

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