Product Details

SNP ID

rs12042478

Assay Type

Functionally Tested

NCBI dbSNP Submissions

1

Location

Chr.1:41509465 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GATGAAACAAAACCCAAAACCCAGT[C/T]TCAGGAACGGCCGCTAGGGCTCGGG

Phenotype

MIM: 606649

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

HIVEP3 PubMed Links

Additional Information

For this assay, SNP(s) [rs116529417] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

HIVEP3

Gene Name

human immunodeficiency virus type I enhancer binding protein 3

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001127714.2	9219	UTR 3			NP_001121186.1
NM_024503.4	9219	UTR 3			NP_078779.2
XM_011541884.2	9219	UTR 3			XP_011540186.1
XM_011541885.2	9219	Intron			XP_011540187.1
XM_011541886.2	9219	Intron			XP_011540188.1
XM_011541887.2	9219	Intron			XP_011540189.1
XM_017001992.1	9219	UTR 3			XP_016857481.1
XM_017001993.1	9219	UTR 3			XP_016857482.1
XM_017001994.1	9219	UTR 3			XP_016857483.1

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