Product Details

SNP ID

rs16957807

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.16:10947476 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

GCTTTCTGGAGGAGACAACACCAGC[A/G]CGGGTTCTCCAAGAATGAACAGAAG

Phenotype

MIM: 600005 MIM: 611303

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

CIITA PubMed Links

Additional Information

For this assay, SNP(s) [rs115418449] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CIITA

Gene Name

class II, major histocompatibility complex, transactivator

There are no transcripts associated with this gene.

Gene

CLEC16A

Gene Name

C-type lectin domain family 16 member A

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001243403.1		Intron			NP_001230332.1
NM_015226.2		Intron			NP_056041.1
XM_005255210.1		Intron			XP_005255267.1
XM_005255211.1		Intron			XP_005255268.1
XM_005255213.1		Intron			XP_005255270.1
XM_005255214.1		Intron			XP_005255271.1
XM_005255215.3		Intron			XP_005255272.1
XM_005255216.1		Intron			XP_005255273.1
XM_006720870.3		Intron			XP_006720933.1
XM_011522434.1		Intron			XP_011520736.1
XM_011522435.1		Intron			XP_011520737.1
XM_011522436.2		Intron			XP_011520738.1
XM_011522437.2		Intron			XP_011520739.1
XM_011522438.2		Intron			XP_011520740.1
XM_011522439.2		Intron			XP_011520741.1
XM_011522440.2		Intron			XP_011520742.1
XM_017023089.1		Intron			XP_016878578.1
XM_017023090.1		Intron			XP_016878579.1

Gene

DEXI

Gene Name

Dexi homolog

There are no transcripts associated with this gene.

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