Product Details

SNP ID

rs10484920

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.6:151657912 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

CTGGCAAAAAAAAAGTATGATGACC[A/G]GAGTTGTTCACTCTTTTAAGCTTTA

Phenotype

MIM: 133430

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

ESR1 PubMed Links

Additional Information

For this assay, SNP(s) [rs11286608] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

ESR1

Gene Name

estrogen receptor 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_000125.3		Intron			NP_000116.2
NM_001122740.1		Intron			NP_001116212.1
NM_001122741.1		Intron			NP_001116213.1
NM_001122742.1		Intron			NP_001116214.1
NM_001291230.1		Intron			NP_001278159.1
NM_001291241.1		Intron			NP_001278170.1
NM_001328100.1		Intron			NP_001315029.1
XM_006715374.3		Intron			XP_006715437.1
XM_006715375.3		Intron			XP_006715438.1
XM_011535543.2		Intron			XP_011533845.1
XM_011535544.2		Intron			XP_011533846.1
XM_011535545.2		Intron			XP_011533847.1
XM_011535547.2		Intron			XP_011533849.1
XM_011535549.2		Intron			XP_011533851.1
XM_017010376.1		Intron			XP_016865865.1
XM_017010377.1		Intron			XP_016865866.1
XM_017010378.1		Intron			XP_016865867.1
XM_017010379.1		Intron			XP_016865868.1
XM_017010380.1		Intron			XP_016865869.1
XM_017010381.1		Intron			XP_016865870.1
XM_017010382.1		Intron			XP_016865871.1
XM_017010383.1		Intron			XP_016865872.1

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