Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: SEC61A2
Entrez Gene ID: 55176
Gene Name: Sec61 translocon alpha 2 subunit
Gene Aliases: -
Chromosome Location: Chr.10: 12129641 - 12169958 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NR_024577.2		4 - 5	422	102
GenBank mRNA	AK057532.1	-	4 - 5	363	102

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	FY213180.1	-	2 - 3			Chr. 10 - 12118780 - 12149667 [-] on Build GRCh38	102
GenBankmRNA	DB454249.1	-	4 - 5	395		Chr. 10 - 12129668 - 12143195 [+] on Build GRCh38	102
GenBankmRNA	DB457301.1	-	4 - 5	386		Chr. 10 - 12129677 - 12143196 [+] on Build GRCh38	102
GenBankmRNA	DB064687.1	-	4 - 5	361		Chr. 10 - 12129702 - 12149696 [+] on Build GRCh38	102
GenBankmRNA	DB026597.1	-	4 - 5	363		Chr. 10 - 12129701 - 12149713 [+] on Build GRCh38	102
GenBankmRNA	DA612636.1	-	4 - 5	336		Chr. 10 - 12129728 - 12149872 [+] on Build GRCh38	102
GenBankmRNA	HY040326.1	-	4 - 5	344		Chr. 10 - 12129719 - 12143198 [+] on Build GRCh38	102
GenBankmRNA	BP251468.1	-	4 - 5	375		Chr. 10 - 12129688 - 12149728 [+] on Build GRCh38	102

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	microRNA 548ak	MIR548AK		-11.6kb	Anti-sense	Chr. - 12130760 - 12130816 on Build GRCh38
Downstream	nudix hydrolase 5	NUDT5	YSA1, YSA1H, YSAH1	22.1kb	Anti-sense	Chr. - 12165328 - 12196144 on Build GRCh38

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