Product Details

Assay Reference Genome
Location

Chr.4:89736400 on build GRCh38
Cytoband
4q22.1
Species
Homo sapiens
Variation Type
Copy Number

Additional Information

For this assay, SNP(s) [rs75051606] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Target Gene Details

Entrez Gene ID
6622
Gene Symbol
SNCA
Gene Name
synuclein alpha
Gene Aliases
NACP, PARK1, PARK4, PD1
Location
Chr.4:89724099-89838324 on build GRCh38
Assay Gene Location
Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Location Protein ID
SNCA NM_000345.3 NP_000336.1
NM_001146054.1 NP_001139526.1
NM_001146055.1 NP_001139527.1
NM_007308.2 NP_009292.1
XM_011532208.2 XP_011530510.1
XM_017008562.1 XP_016864051.1
XM_017008563.1 XP_016864052.1
AK290169.1
AY049786.1 AAL15443.1
BC013293.2 AAH13293.1
BC108275.1 AAI08276.1
CR457058.1 CAG33339.1
CR541653.1 CAG46454.1
D31839.1 BAA06625.1
DA391115.1
JN709859.1
JN709860.1
JN709861.1
JN709862.1
JN709863.1
JN709864.1
JN709865.1
JN709866.1
JN709867.1
JN709868.1
JN709869.1
L08850.1 AAA16117.1
L36674.1 AAA98493.1
L36675.1 AAA98487.1

Target Copy Number Variation Details

DGV Version
Release date: 2016-05-15, GRCh GRCh38
Target
Variation
Location CNV
Subtype
Genes
nsv1012406 Chr4:89246630 - 90245636 on Build GRCh38 Loss CCSER1 MMRN1 SNCA SNCA-AS1 GPRIN3
nsv594806 Chr4:88621130 - 90539537 on Build GRCh38 Gain TIGD2 CCSER1 MMRN1 SNCA FAM13A-AS1 NAP1L5 SNCA-AS1 HERC3 GPRIN3 FAM13A

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