Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
SLA-1
Entrez Gene ID
100037293
Gene Name
MHC class I antigen 1
Gene Aliases
PD1, SLA-1a, sla-
Chromosome Location
Chr.7: 22824137 - 22920154 on Build Sscrofa11.1
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001097431.1 NP_001090900.1 8 - 8 1452 83
XM_021098437.1 XP_020954096.1 - 1737 83
GenBank mRNA AK236791.1 - 9 - 9 1447 83
AK237112.1 - 10 - 10 1459 83
AK390829.1 - 8 - 8 1451 83
AK396028.1 - 9 - 9 1452 83
AY135588.1 - 6 - 6 919 83
AY135589.1 - 9 - 9 1406 83
AY247766.1 - 8 - 8 1436 83
AY459298.1 - 9 - 9 1417 83
DQ303230.1 - 9 - 9 1421 83
DQ992486.1 - 9 - 9 1449 83
DQ992487.1 - 9 - 9 1450 83
DQ992488.1 - 9 - 9 1449 83
DQ992489.1 - 9 - 9 1448 83
DQ992490.1 - 9 - 9 1449 83
DQ992491.1 - 9 - 9 1449 83
DQ992492.1 - 8 - 8 1452 83
DQ992493.1 - 9 - 9 1401 83
EF471311.1 - 8 - 8 1398 83
EF472234.1 - 7 - 7 1171 83
EU440342.1 - 8 - 8 1417 83
EU440343.1 - 8 - 8 1417 83
KU754553.1 - 8 - 8 1454 83

Gene Symbol
LOC100513601
Entrez Gene ID
100513601
Gene Name
patr class I histocompatibility antigen, A-126 alpha chain-like
Gene Aliases
PA1, PD1, SLA-1, SLA-1a, SLA-1b, SLA-P1, SLA1
Chromosome Location
Chr.7: 22888616 - 22920154 on Build Sscrofa11.1
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
GenBank mRNA AF464002.1 - 8 - 8 1488 83
AF464016.1 - 8 - 8 1488 83
AK232064.1 - 8 - 8 1432 83
AK232719.1 - 8 - 8 1435 83
AK233366.1 - 8 - 8 1439 83
AK237395.1 - 8 - 8 1435 83
AK237474.1 - 8 - 8 1098 83
AK237547.1 - 8 - 8 1201 83
AK346139.1 - 8 - 8 1435 83
AK346419.1 - 8 - 8 1435 83
AK350415.1 - 8 - 8 1172 83
AK351187.1 - 8 - 8 1424 83
AK351887.1 - 8 - 8 1436 83
AK391040.1 - 8 - 8 1460 83
AK396599.1 - 8 - 8 1726 83
AK396645.1 - 8 - 8 1215 83
AK397821.1 - 8 - 8 1204 83
AK398003.1 - 8 - 8 1440 83
AK398067.1 - 8 - 8 1471 83
AK398228.1 - 8 - 8 1436 83
AK398945.1 - 8 - 8 1438 83
AK400366.1 - 8 - 8 1438 83
AY135591.1 - 8 - 8 1406 83
AY135592.1 - 8 - 8 1405 83
AY135593.1 - 8 - 8 1401 83
AY135595.1 - 8 - 8 1406 83
AY247764.1 - 8 - 8 1435 83
AY247765.1 - 8 - 8 1436 83
AY459297.1 - 8 - 8 1427 83
AY459306.1 - 8 - 8 1427 83
DQ303228.1 - 8 - 8 1406 83
DQ303229.1 - 9 - 9 1406 83
EF125045.1 - 8 - 8 1431 83
EF125046.1 - 8 - 8 1431 83
EF472233.1 - 8 - 8 1436 83
EU170457.1 - 8 - 8 1406 83
EU440334.1 - 8 - 8 1406 83
EU440336.1 - 8 - 8 1406 83
KU754545.1 - 8 - 8 1439 83
KU754552.1 - 8 - 8 1439 83
KU754557.1 - 8 - 8 1439 83

Gene Symbol
LOC100622689
Entrez Gene ID
100622689
Gene Name
patr class I histocompatibility antigen, A-126 alpha chain-like
Gene Aliases
PD1, SLA, SLA-1
Chromosome Location
-
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001246245.1 NP_001233174.1 8 - 8 1428 83
GenBank mRNA AF464013.1 - 9 - 9 1337 83
AY247767.1 - 8 - 8 1437 83
EF589959.1 - 8 - 8 1428 83

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