Product Details

SNP ID

rs201558628

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.16:1980093 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TGGGTACAGAAGGGCTGCAGGCAGC[A/G]CAGGCTCTGAGCCTCCAGACTGTGG

Phenotype

MIM: 600924 MIM: 611256 MIM: 603927 MIM: 605915

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

GFER PubMed Links

Additional Information

For this assay, SNP(s) [rs61729118] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

GFER

Gene Name

growth factor, augmenter of liver regeneration

There are no transcripts associated with this gene.

Gene

NOXO1

Gene Name

NADPH oxidase organizer 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001267721.1	872	Missense Mutation	CGC,TGC	R168C	NP_001254650.1
NM_144603.3	872	Missense Mutation	CGC,TGC	R163C	NP_653204.1
NM_172167.2	872	Missense Mutation	CGC,TGC	R164C	NP_751907.1
NM_172168.2	872	Missense Mutation	CGC,TGC	R169C	NP_751908.1
XM_005255099.4	872	Missense Mutation	CGC,TGC	R169C	XP_005255156.1
XM_017022927.1	872	Missense Mutation	CGC,TGC	R169C	XP_016878416.1
XM_017022928.1	872	Missense Mutation	CGC,TGC	R169C	XP_016878417.1

Gene

SYNGR3

Gene Name

synaptogyrin 3

There are no transcripts associated with this gene.

Gene

TBL3

Gene Name

transducin beta like 3

There are no transcripts associated with this gene.

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