Product Details

SNP ID

rs2073200

Assay Type

Validated

NCBI dbSNP Submissions

NA

Location

Chr.22:42872089 on Build GRCh38

Set Membership

HapMap Validated

Context Sequence [VIC/FAM]

GGAATCTCCCTGTGGCTCTAATGTA[A/T]TAACGTGGTTCCATTTATCTTTGGT

Phenotype

MIM: 604960

Polymorphism

A/T, Transversion Substitution

Allele Nomenclature

Literature Links

PACSIN2 PubMed Links

Additional Information

For this assay, SNP(s) [rs79192562] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PACSIN2

Gene Name

protein kinase C and casein kinase substrate in neurons 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001184970.1		Intron			NP_001171899.1
NM_001184971.1		Intron			NP_001171900.1
NM_007229.3		Intron			NP_009160.2
XM_005261319.3		Intron			XP_005261376.1
XM_011529846.1		Intron			XP_011528148.1
XM_011529847.2		Intron			XP_011528149.1
XM_011529848.2		Intron			XP_011528150.1
XM_011529849.2		Intron			XP_011528151.1
XM_011529850.2		Intron			XP_011528152.1
XM_011529851.2		Intron			XP_011528153.1
XM_011529852.1		Intron			XP_011528154.1
XM_011529853.1		Intron			XP_011528155.1
XM_017028562.1		Intron			XP_016884051.1
XM_017028563.1		Intron			XP_016884052.1
XM_017028564.1		Intron			XP_016884053.1
XM_017028565.1		Intron			XP_016884054.1
XM_017028566.1		Intron			XP_016884055.1
XM_017028567.1		Intron			XP_016884056.1
XM_017028568.1		Intron			XP_016884057.1

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