Product Details

SNP ID

rs6559872

Assay Type

Validated

NCBI dbSNP Submissions

NA

Location

Chr.9:85550131 on Build GRCh38

Set Membership

HapMap Validated

Context Sequence [VIC/FAM]

GTCAGGCTGAGTGTGCAAAGAGGAG[G/T]AAGTTAGCGGTGCAAAGAGGTATAC

Phenotype

MIM: 606830

Polymorphism

G/T, Transversion Substitution

Allele Nomenclature

Literature Links

AGTPBP1 PubMed Links

Additional Information

For this assay, SNP(s) [rs35611324] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

AGTPBP1

Gene Name

ATP/GTP binding protein 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001286715.1		Intron			NP_001273644.1
NM_001286717.1		Intron			NP_001273646.1
NM_015239.2		Intron			NP_056054.2
XM_005251847.3		Intron			XP_005251904.1
XM_005251848.2		Intron			XP_005251905.1
XM_005251849.3		Intron			XP_005251906.1
XM_011518418.2		Intron			XP_011516720.1
XM_011518420.2		Intron			XP_011516722.1
XM_011518421.2		Intron			XP_011516723.1
XM_017014544.1		Intron			XP_016870033.1
XM_017014545.1		Intron			XP_016870034.1
XM_017014546.1		Intron			XP_016870035.1
XM_017014547.1		Intron			XP_016870036.1
XM_017014548.1		Intron			XP_016870037.1
XM_017014549.1		Intron			XP_016870038.1
XM_017014550.1		Intron			XP_016870039.1

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