Product Details

SNP ID

rs1041098

Assay Type

Validated

NCBI dbSNP Submissions

NA

Location

Chr.6:155264997 on Build GRCh38

Set Membership

HapMap Validated

Context Sequence [VIC/FAM]

ATTGTTGTATAAAGGTTTTCTGTTA[C/T]ATTTAATCTGGAGTTCCTGGATGAT

Phenotype

MIM: 607033 MIM: 604709

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

CLDN20 PubMed Links

Additional Information

For this assay, SNP(s) [rs12524284] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CLDN20

Gene Name

claudin 20

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001001346.3		Intron			NP_001001346.1
XM_011535848.2		Intron			XP_011534150.1

Gene

TFB1M

Gene Name

transcription factor B1, mitochondrial

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_016020.3		Intron			NP_057104.2
XM_005267006.4		Intron			XP_005267063.1
XM_011535870.1		Intron			XP_011534172.1
XM_011535871.1		Intron			XP_011534173.1
XM_011535872.2		Intron			XP_011534174.1
XM_011535873.2		Intron			XP_011534175.1
XM_017010917.1		Intron			XP_016866406.1

Gene

TIAM2

Gene Name

T-cell lymphoma invasion and metastasis 2

There are no transcripts associated with this gene.

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