Product Details

SNP ID

rs1059161

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.6:85607967 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CCTGATGGAAGTGGCCAAAACTGCT[A/C]GTCCCGCAACCAAGAAATCCTAGGG

Phenotype

MIM: 616686

Polymorphism

A/C, Transversion Substitution

Allele Nomenclature

Literature Links

SYNCRIP PubMed Links

Additional Information

For this assay, SNP(s) [rs78422167] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

SYNCRIP

Gene Name

synaptotagmin binding cytoplasmic RNA interacting protein

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001159673.1	6524	UTR 3			NP_001153145.1
NM_001159674.1	6524	UTR 3			NP_001153146.1
NM_001159675.1	6524	Intron			NP_001153147.1
NM_001159676.1	6524	UTR 3			NP_001153148.1
NM_001159677.1	6524	UTR 3			NP_001153149.1
NM_001253771.1	6524	UTR 3			NP_001240700.1
NM_006372.4	6524	Intron			NP_006363.4
XM_005248635.4	6524	Intron			XP_005248692.1
XM_005248636.2	6524	Intron			XP_005248693.1
XM_005248637.2	6524	Intron			XP_005248694.1
XM_017010176.1	6524	Intron			XP_016865665.1
XM_017010177.1	6524	Intron			XP_016865666.1
XM_017010178.1	6524	Intron			XP_016865667.1
XM_017010179.1	6524	Intron			XP_016865668.1
XM_017010180.1	6524	Intron			XP_016865669.1

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