Product Details

SNP ID

rs5020842

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.15:75029969 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CCCATCCCACGCAGCCAGCGTTTGG[C/T]GGGAGGGGGGTTGTGAGGAAAGGGT

Phenotype

MIM: 609854 MIM: 613766

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

PPCDC PubMed Links

Additional Information

For this assay, SNP(s) [rs77489018] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PPCDC

Gene Name

phosphopantothenoylcysteine decarboxylase

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001301101.1		Intron			NP_001288030.1
NM_001301102.1		Intron			NP_001288031.1
NM_001301103.1		Intron			NP_001288032.1
NM_001301104.1		Intron			NP_001288033.1
NM_001301105.1		Intron			NP_001288034.1
NM_021823.4		Intron			NP_068595.3
XM_017022461.1		Intron			XP_016877950.1
XM_017022462.1		Intron			XP_016877951.1
XM_017022463.1		Intron			XP_016877952.1
XM_017022464.1		Intron			XP_016877953.1
XM_017022465.1		Intron			XP_016877954.1

Gene

SCAMP5

Gene Name

secretory carrier membrane protein 5

There are no transcripts associated with this gene.

View Full Product Details