Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: cac
Entrez Gene ID: 32158
Gene Name: cacophony
Gene Aliases: 13, CAC, CG1522, CG15928, CG43368, Ca-alpha1A, Ca[[V]]2.1, Cac, Cac1, DMCA1A, Dmca1A, Dmcalpha1A, Dmel\CG43368, Dmel_CG43368, EE171, H18, H47, L13, P18, alpha1A, cac1, dCac1, l(1)11Aa, l(1)13, l(1)L13, ldg, nbA, nonB, opm18, opm47
Chromosome Location: Chr.X: 11931280 - 11985087 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID): FBgn0263111

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001014732.4	NP_001014732.1	31 - 32	5984	89
	NM_001014733.5	NP_001014733.1	31 - 32	5984	89
	NM_001014734.4	NP_001014734.1	31 - 32	5981	89
	NM_001014735.4	NP_001014735.1	31 - 32	5981	89
	NM_001258707.2	NP_001245636.1	33 - 34	6212	89
	NM_001258708.2	NP_001245637.1	30 - 31	5783	89
	NM_001258709.2	NP_001245638.1	29 - 30	5905	89
	NM_001258710.2	NP_001245639.1	30 - 31	5987	89
	NM_001272548.1	NP_001259477.1	31 - 32	5971	89
	NM_001370017.1	NP_001356943.1	30 - 31	5978	89
	NM_001370018.1	NP_001356944.1	30 - 31	5978	89
	NM_001370019.1	NP_001356945.1	30 - 31	5978	89
	NM_078578.5	NP_511133.2	30 - 31	5978	89
	NM_206693.5	NP_996416.1	30 - 31	5987	89
	NM_206694.4	NP_996417.1	30 - 31	5997	89
	NM_206695.4	NP_996418.1	30 - 31	5978	89
	NM_206696.6	NP_996419.1	30 - 31	5978	89
	NM_206697.4	NP_996420.1	30 - 31	5978	89